Getting a good NEET score is only part of the journey to becoming a doctor. The other big step, often the more important one, is the counselling and choice filling process.
Every year thousands of students in India lose an opportunity of getting a medical seat, not because of bad marks, but because they made mistakes in their choice filling process.
A trivial mistake, like reversing the order of the colleges, or filling out your preferences late, or ignoring the seats matrix, can change your career entirely.
Choice filling is not just a random assortment of colleges, it is a whole process requiring attention to research, plans and awareness of the rules.
Many first timers making applications, and many parents for that matter, do not appreciate the seriousness of the process, only to regret their fatal choice to fill out the process poorly or incompletely and miss on the medicine seat that they could indeed have received.
The good news is that with the right guidance and a little bit of care, these mistakes can be easily avoided.

In this blog, we will walk you through the most common mistakes students make during NEET counselling choice filling and explain how you can avoid them.
Whether you are aiming for an MBBS seat in a government college or a BDS seat in a reputed private institution, understanding these pitfalls will ensure you make informed decisions and maximize your chances of getting the right seat.
Contents
- 1 Common Mistakes in Choice Filling
- 1.1 1. Not Understanding the NEET Counselling Process
- 1.2 2. Ignoring the Official Seat Matrix
- 1.3 3. Not Conducting Proper Research while Making College Preference List
- 1.4 4. Filling Too Few Choices in the Preference List
- 1.5 5. Misunderstanding Choice Order Priority
- 1.6 6. Overlooking Bond Policies and Compulsory Service Rules
- 1.7 7. Not Checking Category-Wise Seat Distribution
- 1.8 8. Relying on One Years Cut-off Data
- 1.9 9. Not Factoring in Tuition/Hospital Fees
- 1.10 11. Confusing AIQ and State Quota Choices
- 1.11 12. Not Reviewing Choices Before Locking
- 2 Frequently Asked Questions
- 2.1 Q. What is the most common mistake students make during NEET choice filling?
- 2.2 Q. Is it risky to fill fewer colleges in my choice list?
- 2.3 Q. How important is the order of preferences in choice filling?
- 2.4 Q. Should I depend only on last year’s NEET cut-off for my decisions?
- 2.5 Q. Why is the seat matrix important in NEET counselling?
- 2.6 Q. What are bond policies in medical colleges and why should I care?
- 2.7 Q. Do I need to register separately for AIQ and state quota counselling?
- 2.8 Q. How can I avoid mistakes while locking my choices?
Common Mistakes in Choice Filling
Choice filling stage in NEET counselling may seem to be straightforward. However, it may be one of the most critical worst steps to assure your MBBS or BDS seat. Every year, many students across India get out of good colleges not because of their NEET score, but because of errors committed during the choice filling phase that could have been avoided.
Almost all students undertake avoidable errors ranging from misunderstanding the counselling process to allowing their fear of NEET or mcnc decisions to impact their choices of medical colleges and inadvertent failures to me important deadlines and scrree these, like fees and bond policies, can affect your eventual baptism. Let’s identify the avoidable mistakes during choice filling so that all NEET aspirants and their parents can better appreciate them.
1. Not Understanding the NEET Counselling Process
Many students get into NEET counselling without a full understanding. There are two main types of counselling – All India Quota (AIQ) which is conducted by the MCC, and state quota counselling conducted by the respective state authorities. Each has its own registration process, eligibility guidelines and schedule. Some students assume, once they have registered with MCC, they would be considered for state quota seats – this is not the case.
Often, when students don’t understand how different rounds work (Round 1, Round 2, Mop-up and Stray Vacancy), they leave themselves open to missing opportunities. Before filling in choices it is important to read all the guidelines for counselling, eligibility guidelines and allotment procedures. The more informed you are as a candidate, the less confusion you will have and the better your chances are in securing a seat.
2. Ignoring the Official Seat Matrix
The official seat matrix is a very important document that tells students exactly how many seats are left in each college for each category. However, many students skip reading it and fill out their choices indiscriminately, resulting in deciding to apply for colleges which had either limited seating or no seating in their category.
For example, an OBC candidate may fill out a list of colleges with no OBC seats in the AIQ quota or in the state quota. You should always download official seat matrix from the counselling portal and incorporate the seat matrix when preparing preference list; it ensures that your choices are sensible and logical, and they correspond with the actual availability of seating.
3. Not Conducting Proper Research while Making College Preference List
Another common mistake is failure to research properly before preparing a list of colleges. Students compile a list based on friends or relatives or based on a list that does not consider many – and important – factors that affect their education such as location, educational infrastructure, quality of faculty, quality of hospital facilities, internship opportunities, college fees, and hostel facilities.
Remember, you are likely to spend over five years at the same institution – these factors are very important! Without research you will likely regret your decision later – after you have been admitted to a college that does not satisfy your expectations! You must research before you rank, by preparing a checklist, comparing options, and engaging with trusted sources that provide useful information.
4. Filling Too Few Choices in the Preference List
Numerous students think that filling up only a few choices will enhance their chances of getting one of those colleges. In reality, this method is extremely risky. In the event that you have limited your choices and do not get allotted any of them, you could actually end up with no seat at all.
The common sense approach is to maximize your choices to the limit allowed, ordered in a rational manner. This way, even if your initial preferences are not allotted, you have a fall back in the subsequent options. The more extended and thought-out your list, the greater the chance of obtaining a seat overall.
5. Misunderstanding Choice Order Priority
Some students don’t realize that the order of preferences is crucial in seat allotment. The counselling software allots seats based on your rank and the sequence in which you’ve listed colleges. If you put a less-preferred college above your dream college, you might get locked into a seat you never wanted.
Random or emotional ordering is one of the most common mistakes. Always arrange colleges in a priority order — starting with your most desired and realistic options, followed by safe alternatives.
6. Overlooking Bond Policies and Compulsory Service Rules
Many medical colleges, especially government institutions, have bond agreements requiring students to serve in rural areas or pay hefty penalty amounts if they fail to comply. Many candidates ignore these rules during choice filling and face difficulties later.
For example, some states require to 5 years of compulsory service, while others have penalty bonds ranging from Rs. 5 lakh to Rs. 1 crore. Before selecting a college, check the bond policy and ensure you are comfortable with its conditions. Overlooking this can lead to unwanted obligations after graduation.
7. Not Checking Category-Wise Seat Distribution
Reservation holds great importance in NEET counselling but students tend to misunderstand it. Each college have a specific number of seats for General, Other Backward Classes(OBC), SC, ST, EWS and other special categories. If you do not check the category-wise seat breakup, you will make your choices, but they may not be choices you are categorized in. This would decrease your allotment chances. Always check category-wise availability of seats before adding a college to your preference list.
8. Relying on One Years Cut-off Data
It’s good to plan by referring to last year’s cut-offs. However, using it in a single mind as a key part of your choosing process is inappropriate. Cut-offs vary for many reasons from year to year e.g. difficulty of NEET, number of candidates, reservations, number of seats available, etc. Students frequently also choose not to apply to good choices simply to see what the cut-off was last year; with the argument that the cut-off last year was too high being clearly ridiculous.
In the same breath, students will apply to options – anywhere – without any thought that last year the cut-off was too low. The proper way to proceed should be to regard cut-offs as some advice to know if you must have a good understanding of your own ranking, the competition and to some experts.
9. Not Factoring in Tuition/Hospital Fees
All financial aspects of choice filling are important; yet we frequently see families focusing on seat allotment, without any consideration of the fees that are involved. Government Colleges have substantially lower tuition fees than private colleges or deemed universities where tuition fees in lac’s per annum are ordinary.
Lifestyle fees for a mess, hostel, and other daily meal fees can also add up to large amounts. To eliminate affordability from the process can lead to problems at the end of the cycle, if some students wind up withdrawing. Prior to accepting your choices, you and your family should review the official fee structure to make an informed decision.
11. Confusing AIQ and State Quota Choices
One mistake that is seen repeatedly is mixing up the All India Quota and State Quota counselling. AIQ is run by MCC – 15% of available seats in government colleges and deemed universities will fill through AIQ, and the state counselling caters to 85% of state government college seats and private colleges.
Students often do a self-generated process of thought in that applying to AIQ means they applied to State Quota, and vice versa. If you want to be considered for both, ensure you register separately for both processes!
12. Not Reviewing Choices Before Locking
You cannot change your preferences once you lock. Every year we see students rush through the process and submit their preferences and not take time to review them properly. There are normally errors like duplicated choices, or missed preferred colleges in selection list, or missing out in selection order.
The way preferences were submitted can drastically change the outcome of your seats/annexure. Always take time to get a review done of your choice list and preferably with your parents or an experienced clinician to make sure you are not regretting the locked options submitted.
Conclusion:
Choosing your preferences in NEET counselling is not as easy as simply clicking on college names. It is not only a momentous step in your medical career, but it is an important decision about your future, and you want to make the right choices.
Every year, students lose out on seats, not because they scored poorly in NEET, but because they made small, avoidable errors when filling in their preferences.
Whether it is misunderstanding the counselling process in general, ignoring the seat matrix, forgetting to check or confirm fees, and locking their choices without reviewing them, all errors can make a world of difference to your allotment.
The best part is you can avoid all of these mistakes. Through some thoughtful investigative work, familiarising yourself with the rules of the counselling process and some careful planning, you can make your NEET score work for you by attaining a seat in the right college.
Remember, this is one of the biggest decisions of your medical career. Take your time, do your research along the way, and seek expert guidance if necessary. A strategic way of choice filling means that your effort and hard work in the NEET exam will yield say an MBBS or BDS seat that you deserve.
Frequently Asked Questions
Q. What is the most common mistake students make during NEET choice filling?
A. The most common complaint is failing to thoroughly understand the counselling process. Students think that once they register with one counselling authority, they would be covered for all quotas. Students are unaware that All India Quota and State Quota are two different authorities. All of this confusion leaves students in confusion and often missing out on seats.
Q. Is it risky to fill fewer colleges in my choice list?
A. Filling only a few choices will seriously hamper your chances getting a seat. Always fill the maximum choices available to you in a sensible sorted order. You need to have back-ups.
Q. How important is the order of preferences in choice filling?
A. The allotment system takes your rank and the order of preference into account. If you put a college lower than another in your order of preference (for example, a less-preferred college above your dream college), you may end up getting locked into the wrong college.
Q. Should I depend only on last year’s NEET cut-off for my decisions?
A. Each year the cut-offs are different based upon how challenging the examination was or the number of students applying for how many seats. Cut-off numbers should always be used as reference points; however, you should never be dictated by the decisions made from last year’s.
Q. Why is the seat matrix important in NEET counselling?
A. The seat matrix shows the exact number of seats in each college by category. Ignoring it may lead you to select colleges that don’t even have seats for your category, wasting your choices.
Q. What are bond policies in medical colleges and why should I care?
A. Many government colleges require students to serve in rural areas after graduation or pay a financial penalty if they skip. Bond rules vary by state, so ignoring them during choice filling can lead to problems later.
Q. Do I need to register separately for AIQ and state quota counselling?
A. AIQ counselling is managed by MCC, while state quota counselling is conducted by state authorities. Registering for one does not automatically register you for the other.
Q. How can I avoid mistakes while locking my choices?
A. Always review your list before locking. Cross-check with your parents or a counsellor to ensure the order of preferences, category eligibility, and fees align with your plans. Once locked, choices cannot be changed.

My name is Rajesh Mishra. For the past 18 years, I have been helping students get admission into the right colleges. I believe that even students with average or low ranks deserve admission in good colleges—without chasing agents, falling for false promises, or paying donations.
To share my experience and guidance with more students, I write blogs on NEET, Engineering, and AYUSH counselling.
You can connect with me directly through social media and other platforms.